* using log directory 'd:/Rcompile/CRANpkg/local/4.3/fusen.Rcheck' * using R version 4.3.3 (2024-02-29 ucrt) * using platform: x86_64-w64-mingw32 (64-bit) * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'fusen/DESCRIPTION' ... OK * this is package 'fusen' version '0.6.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'fusen' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s] OK * checking whether the package can be loaded with stated dependencies ... [2s] OK * checking whether the package can be unloaded cleanly ... [2s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s] OK * checking whether the namespace can be unloaded cleanly ... [3s] OK * checking loading without being on the library search path ... [3s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [11s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [16s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [298s] ERROR Running 'testthat.R' [298s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(fusen) > > test_check("fusen") Created file .here in D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\add.flat.template14cd034f7566 . Please start a new R session in the new project directory. '0-dev_history.Rmd' already exists. It was not overwritten. Set `add_flat_template(overwrite = TRUE)` if you want to do so. Created file .here in D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dev.history.template14cd0419a56c5 . Please start a new R session in the new project directory. v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/dev.history.template14cd0419a56c5". ! Title was modified to 'Title Case'. v Adding "MIT + file LICENSE" to 'License'. v Writing 'LICENSE'. v Writing 'LICENSE.md'. v Adding "^LICENSE\\.md$" to '.Rbuildignore'. v Setting active project to "". Created file .here in D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dev.history.template.uu14cd064832c95 . Please start a new R session in the new project directory. v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/dev.history.template.uu14cd064832c95". ! Title was modified to 'Title Case'. v Writing 'LICENSE.md'. v Adding "^LICENSE\\.md$" to '.Rbuildignore'. v Setting active project to "". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitfull14cd02e39618e". ✔ Setting active project to "". -- config file for dev/flat_full.Rmd ------------------------------------------- -- config file for dev/flat_full.Rmd ------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitminimal.package14cd029242dc4". ✔ Setting active project to "". -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- config file for dev/flat_minimal.Rmd ---------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitminpkg14cd045ff2601". ✔ Setting active project to "". -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- config file for dev/flat_minimal.Rmd ---------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitminimal.flat14cd0345d4ca1". ✔ Adding "MIT + file LICENSE" to 'License'. ✔ Writing 'LICENSE'. ✔ Writing 'LICENSE.md'. ✔ Adding "^LICENSE\\.md$" to '.Rbuildignore'. ✔ Setting active project to "". -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- config file for dev/flat_minimal.Rmd ---------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitminflat14cd04211142a". ✔ Adding "MIT + file LICENSE" to 'License'. ✔ Writing 'LICENSE'. ✔ Writing 'LICENSE.md'. ✔ Adding "^LICENSE\\.md$" to '.Rbuildignore'. ✔ Setting active project to "". -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- config file for dev/flat_minimal.Rmd ---------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitadd14cd06cdf509c". ✔ Adding "MIT + file LICENSE" to 'License'. ✔ Writing 'LICENSE'. ✔ Writing 'LICENSE.md'. ✔ Adding "^LICENSE\\.md$" to '.Rbuildignore'. ✔ Setting active project to "". -- config file for dev/flat_additional.Rmd ------------------------------------- -- config file for dev/flat_additional.Rmd ------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitadditional14cd0277e4304". ✔ Adding "MIT + file LICENSE" to 'License'. ✔ Writing 'LICENSE'. ✔ Writing 'LICENSE.md'. ✔ Adding "^LICENSE\\.md$" to '.Rbuildignore'. ✔ Setting active project to "". -- config file for dev/flat_additional.Rmd ------------------------------------- -- config file for dev/flat_additional.Rmd ------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteach14cd05fcc6a53". ✔ Setting active project to "". -- config file for dev/flat_teaching.Rmd --------------------------------------- -- config file for dev/flat_teaching.Rmd --------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "". -- config file for dev/flat_teaching.Rmd --------------------------------------- -- config file for dev/flat_teaching.Rmd --------------------------------------- Created file .here in D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\other.names14cd056bd54ae . Please start a new R session in the new project directory. v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/other.names14cd056bd54ae". i Loading other.names14cd056bd54ae Writing 'NAMESPACE' v Adding knitr to 'Suggests' field in DESCRIPTION. [ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is installed. [ ] Then directly refer to functions with `knitr::fun()`. v Adding "inst/doc" to '.gitignore'. -- config file for dev/flat_hello_2.Rmd ---------------------------------------- v R: R/hello.R was added to the config file v tests: tests/testthat/test-hello.R was added to the config file v vignettes: vignettes/hello.Rmd was added to the config file Saving attachment parameters to yaml config file Updating other.names14cd056bd54ae documentation i Loading other.names14cd056bd54ae Writing 'NAMESPACE' Writing 'hello.Rd' i Loading other.names14cd056bd54ae [+] 2 package(s) added: rmarkdown, testthat. v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". Created file .here in D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\devdir14cd06b4e3856 . Please start a new R session in the new project directory. -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\chunk.ex v Creating 'D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/chunk.export.14cd01c2c2afa/foosen/'. v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/chunk.export.14cd01c2c2afa/foosen". v Creating 'R/'. v Writing a sentinel file '.here'. [ ] Build robust paths within your project via `here::here()`. i Learn more at . v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". v New directory created: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\chunk.export.14cd01c2c2afa\foosen v Added D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\chunk.export.14cd01c2c2afa\foosen/dev/flat_minimal_package.Rmd, D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\chunk.export.14cd01c2c2afa\foosen/dev/0-dev_history.Rmd [1] "test without interactive" -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\chunk.no v Creating 'D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/chunk.noRd.14cd045b9683a/foosen/'. v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/chunk.noRd.14cd045b9683a/foosen". v Creating 'R/'. v Writing a sentinel file '.here'. [ ] Build robust paths within your project via `here::here()`. i Learn more at . v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". v New directory created: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\chunk.noRd.14cd045b9683a\foosen v Added D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\chunk.noRd.14cd045b9683a\foosen/dev/flat_minimal_package.Rmd, D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\chunk.noRd.14cd045b9683a\foosen/dev/0-dev_history.Rmd [1] "test without interactive" -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummy14c ! The path: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummy14cd05bcc39dd\foosen already exists. x Aborting fusen project creation. Set `create_fusen(overwrite = TRUE)` to avoid a stop. ! The path: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummy14cd05bcc39dd\foosen already exists. v Added D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummy14cd05bcc39dd\foosen/dev/flat_full.Rmd, D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummy14cd05bcc39dd\foosen/dev/0-dev_history.Rmd -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\create.f -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\create.f -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\create.f -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\create.f -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\subdir\s -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummygui -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummygui -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummygui -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummygui -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummy14c -- Initializing git repository ------------------------------------------------- -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummy14c -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummygui -- Initializing git repository ------------------------------------------------- -- Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummygui ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/deprecate14cd0b26905". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ The flat file flat_full.Rmd has been deprecated. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ! Title was modified to 'Title Case'. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/drawpkg.structure14cd0545078b7". -- No NAMESPACE file found there: D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/ -- keep ------------------------------------------------------------------------ ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── -- Reading NAMESPACE file -------------------------------------------------------------------------- -- flat_full.Rmd ----------------------------------------------------------------------------------- -- keep -------------------------------------------------------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.tests14cd0227b4a31". ✔ Adding "MIT + file LICENSE" to 'License'. ✔ Writing 'LICENSE'. ✔ Writing 'LICENSE.md'. ✔ Adding "^LICENSE\\.md$" to '.Rbuildignore'. ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.tests14cd0227b4a31". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". Created file .here in D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\dummypackage.special14cd058fe66b0 . Please start a new R session in the new project directory. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/dummypackage.special14cd058fe66b0". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.tests14cd0227b4a31". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.tests14cd0227b4a31". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.tests14cd0227b4a31". -- config file for dev/flat_full.Rmd ------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.tests14cd0227b4a31". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.tests14cd0227b4a31". -- config file for dev/flat_full.Rmd ------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.tests14cd0227b4a31". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/clean.vignette14cd01b3418e6". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". Created file .here in D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\descpackage14cd040f566db . Please start a new R session in the new project directory. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/descpackage14cd040f566db". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". Created file .here in D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\nordpackage14cd06117d6e . Please start a new R session in the new project directory. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/nordpackage14cd06117d6e". ✔ Adding "MIT + file LICENSE" to 'License'. ✔ Writing 'LICENSE'. ✔ Writing 'LICENSE.md'. ✔ Adding "^LICENSE\\.md$" to '.Rbuildignore'. -- config file for dev/flat_full.Rmd ------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Creating 'D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.inflate14cd02427a9/full/'. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.inflate14cd02427a9/full". ✔ Creating 'R/'. ✔ Writing a sentinel file '.here'. ☐ Build robust paths within your project via `here::here()`. ℹ Learn more at . ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ New directory created: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.templates.inflate14cd02427a9\full ✔ Added D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.templates.inflate14cd02427a9\full/dev/flat_full.Rmd, D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.templates.inflate14cd02427a9\full/dev/0-dev_history.Rmd ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.inflate14cd02427a9/full". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Creating 'D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.inflate14cd02427a9/minimal/'. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.inflate14cd02427a9/minimal". ✔ Creating 'R/'. ✔ Writing a sentinel file '.here'. ☐ Build robust paths within your project via `here::here()`. ℹ Learn more at . ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ New directory created: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.templates.inflate14cd02427a9\minimal ✔ Added D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.templates.inflate14cd02427a9\minimal/dev/flat_minimal_package.Rmd, D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.templates.inflate14cd02427a9\minimal/dev/0-dev_history.Rmd ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.inflate14cd02427a9/minimal". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Creating 'D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.inflate14cd02427a9/teaching/'. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.inflate14cd02427a9/teaching". ✔ Creating 'R/'. ✔ Writing a sentinel file '.here'. ☐ Build robust paths within your project via `here::here()`. ℹ Learn more at . ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ New directory created: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.templates.inflate14cd02427a9\teaching ✔ Added D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.templates.inflate14cd02427a9\teaching/dev/flat_teaching.Rmd ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.inflate14cd02427a9/teaching". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/dataset14cd0fcd1b0b". v Adding R to 'Depends' field in DESCRIPTION. v Creating 'data/'. v Setting 'LazyData' to "true" in 'DESCRIPTION'. v Saving "nyc_squirrels" to "data/nyc_squirrels.rda". [ ] Document your data (see ). v Adding "GPL (>= 3)" to 'License'. v Writing 'LICENSE.md'. v Adding "^LICENSE\\.md$" to '.Rbuildignore'. -- config file for dev/flat_full.Rmd ------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/empty.chunks14cd06f922665". ✔ Adding "GPL (>= 3)" to 'License'. ✔ Writing 'LICENSE.md'. ✔ Adding "^LICENSE\\.md$" to '.Rbuildignore'. ✔ Adding R to 'Depends' field in DESCRIPTION. ✔ Creating 'data/'. ✔ Setting 'LazyData' to "true" in 'DESCRIPTION'. ✔ Saving "cars" to "data/cars.rda". ☐ Document your data (see ). -- config file for dev/flat_full.Rmd ------------------------------------------- -- config file for dev/flat_full.Rmd ------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/r6class14cd07e2830bb". ✔ Adding "GPL (>= 3)" to 'License'. ✔ Writing 'LICENSE.md'. ✔ Adding "^LICENSE\\.md$" to '.Rbuildignore'. ✔ Adding R to 'Depends' field in DESCRIPTION. ✔ Creating 'data/'. ✔ Setting 'LazyData' to "true" in 'DESCRIPTION'. ✔ Saving "cars" to "data/cars.rda". ☐ Document your data (see ). -- config file for dev/flat_full.Rmd ------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.deprecated14cd06491597b". v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.no.vignette14cd078153f45". i Loading inflate.no.vignette14cd078153f45 Writing 'NAMESPACE' -- config file for dev/flat_full.Rmd ------------------------------------------- v R: R/my_median.R was added to the config file v R: R/my_other_median.R was added to the config file v tests: tests/testthat/test-my_median.R was added to the config file v tests: tests/testthat/test-my_other_median.R was added to the config file Saving attachment parameters to yaml config file Updating inflate.no.vignette14cd078153f45 documentation i Loading inflate.no.vignette14cd078153f45 Writing 'NAMESPACE' Writing 'my_median.Rd' Writing 'my_other_median.Rd' Writing 'sub_median.Rd' i Loading inflate.no.vignette14cd078153f45 [+] 2 package(s) added: stats, testthat. ! my_median.R has been overwritten ! my_other_median.R has been overwritten ! test-my_median.R has been overwritten ! test-my_other_median.R has been overwritten -- config file for dev/flat_full.Rmd ------------------------------------------- i Some files group already existed and were modified: flat_full.Rmd Documentation parameters were restored from attachment config file. Updating inflate.no.vignette14cd078153f45 documentation i Loading inflate.no.vignette14cd078153f45 Writing 'NAMESPACE' i Loading inflate.no.vignette14cd078153f45 ! my_median.R has been overwritten ! my_other_median.R has been overwritten ! test-my_median.R has been overwritten ! test-my_other_median.R has been overwritten -- config file for dev/flat_full.Rmd ------------------------------------------- i Some files group already existed and were modified: flat_full.Rmd Documentation parameters were restored from attachment config file. Updating inflate.no.vignette14cd078153f45 documentation i Loading inflate.no.vignette14cd078153f45 Writing 'NAMESPACE' i Loading inflate.no.vignette14cd078153f45 -- config file for dev/flat_full.Rmd ------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.twofuns14cd01e682ea0". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.authors14cd03e836fbb". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.tests14cd066677f16". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.tests14cd01408479d". -- config file for dev/flat_full.Rmd ------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.tests14cd072fc1c9e". -- config file for dev/flat_full.Rmd ------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.examples14cd0fd761b6". i Loading inflate.examples14cd0fd761b6 Writing 'NAMESPACE' v Adding knitr to 'Suggests' field in DESCRIPTION. [ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is installed. [ ] Then directly refer to functions with `knitr::fun()`. v Adding "inst/doc" to '.gitignore'. -- config file for dev/flat_full.Rmd ------------------------------------------- v R: R/my_median.R was added to the config file v tests: tests/testthat/test-my_median.R was added to the config file v tests: tests/testthat/test-the_test.R was added to the config file v vignettes: vignettes/get-started.Rmd was added to the config file Saving attachment parameters to yaml config file Updating inflate.examples14cd0fd761b6 documentation i Loading inflate.examples14cd0fd761b6 Writing 'NAMESPACE' Writing 'my_median.Rd' i Loading inflate.examples14cd0fd761b6 [+] 3 package(s) added: stats, rmarkdown, testthat. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/vignette.name14cd031f15e7e". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.fun.in.roxygen14cd01026502c". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". Created file .here in D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\twoexamples14cd03c92677e . Please start a new R session in the new project directory. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/twoexamples14cd03c92677e". ✔ Adding "MIT + file LICENSE" to 'License'. ✔ Writing 'LICENSE'. ✔ Writing 'LICENSE.md'. ✔ Adding "^LICENSE\\.md$" to '.Rbuildignore'. -- config file for dev/flat_full.Rmd ------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.fun.in.roxygen14cd02a02575e". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/dummypackage_@ (special)14cd05a6badd". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflateall.first14cd025be747a". ✔ Adding "MIT + file LICENSE" to 'License'. ✔ Writing 'LICENSE'. ✔ Writing 'LICENSE.md'. ✔ Adding "^LICENSE\\.md$" to '.Rbuildignore'. x The flat file flat_minimal.Rmd is not going to be inflated. It was detected in your flats directory but it is absent from the config file. Please inflate() it manually when you are ready, so that it is accounted the next time. Then you will be able to fully use `inflate_all*()`. ── config file for dev/flat_minimal.Rmd ──────────────────────────────────────── -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- v There are no unregistered files. Documentation parameters were restored from attachment config file. Updating inflateall.first14cd025be747a documentation i Loading inflateall.first14cd025be747a Writing 'NAMESPACE' i Loading inflateall.first14cd025be747a No flat files were inflated -- check not registered files -------------------------------------------------- v There are no unregistered files. Documentation parameters were restored from attachment config file. Updating inflateall.first14cd025be747a documentation i Loading inflateall.first14cd025be747a Deleting 'my_fun.Rd' i Loading inflateall.first14cd025be747a ! The flat file flat_minimal.Rmd is not going to be inflated because it is in state 'inactive or deprecated' No flat files were inflated -- check not registered files -------------------------------------------------- v There are no unregistered files. Documentation parameters were restored from attachment config file. Updating inflateall.first14cd025be747a documentation i Loading inflateall.first14cd025be747a i Loading inflateall.first14cd025be747a -- config file for dev/flat_minimal.Rmd ---------------------------------------- v The flat file flat_minimal.Rmd is going to be inflated -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- v There are no unregistered files. Documentation parameters were restored from attachment config file. Updating inflateall.first14cd025be747a documentation i Loading inflateall.first14cd025be747a Writing 'NAMESPACE' Writing 'my_fun.Rd' i Loading inflateall.first14cd025be747a v The flat file flat_minimal.Rmd is going to be inflated -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- v There are no unregistered files. Documentation parameters were restored from attachment config file. Updating inflateall.first14cd025be747a documentation i Loading inflateall.first14cd025be747a Writing 'NAMESPACE' Writing 'new_fun2.Rd' i Loading inflateall.first14cd025be747a -- config file for dev/flat_minimal_2.Rmd -------------------------------------- v The flat file flat_minimal.Rmd is going to be inflated v The flat file flat_minimal_2.Rmd is going to be inflated -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- config file for dev/flat_minimal_2.Rmd -------------------------------------- -- check not registered files -------------------------------------------------- v There are no unregistered files. Documentation parameters were restored from attachment config file. Updating inflateall.first14cd025be747a documentation i Loading inflateall.first14cd025be747a Writing 'NAMESPACE' Writing 'my_fun.Rd' Writing 'my_fun_from_flat_file2.Rd' Writing 'new_fun2.Rd' i Loading inflateall.first14cd025be747a -- config file for dev/flat_minimal_2.Rmd -------------------------------------- v The flat file flat_minimal.Rmd is going to be inflated v The flat file flat_minimal_2.Rmd is going to be inflated -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- config file for dev/flat_minimal_2.Rmd -------------------------------------- -- check not registered files -------------------------------------------------- v There are no unregistered files. Documentation parameters were restored from attachment config file. Updating inflateall.first14cd025be747a documentation i Loading inflateall.first14cd025be747a Writing 'NAMESPACE' Writing 'my_fun.Rd' i Loading inflateall.first14cd025be747a ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". Created file .here in D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\inflateall.other.pkg14cd01b6c10a4 . Please start a new R session in the new project directory. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflateall.other.pkg14cd01b6c10a4". ── config file for dev/test_minimal.Rmd ──────────────────────────────────────── -- config file for dev/test_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- v There are no unregistered files. Documentation parameters were restored from attachment config file. Updating inflateall.other.pkg14cd01b6c10a4 documentation i Loading inflateall.other.pkg14cd01b6c10a4 Writing 'NAMESPACE' i Loading inflateall.other.pkg14cd01b6c10a4 v The flat file test_minimal.Rmd is going to be inflated -- config file for dev/test_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- v There are no unregistered files. Documentation parameters were restored from attachment config file. Updating inflateall.other.pkg14cd01b6c10a4 documentation i Loading inflateall.other.pkg14cd01b6c10a4 Writing 'NAMESPACE' i Loading inflateall.other.pkg14cd01b6c10a4 ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflateall.nocheck14cd074c53fcf". ── config file for dev/flat_minimal.Rmd ──────────────────────────────────────── v The flat file flat_minimal.Rmd is going to be inflated v There are no unregistered files. Documentation parameters were restored from attachment config file. Updating inflateall.nocheck14cd074c53fcf documentation i Loading inflateall.nocheck14cd074c53fcf Writing 'NAMESPACE' i Loading inflateall.nocheck14cd074c53fcf ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflateall.unregistered14cd036bd2877". ── config file for dev/flat_minimal.Rmd ──────────────────────────────────────── v The flat file flat_minimal.Rmd is going to be inflated -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- cli-31624-4975 Documentation parameters were restored from attachment config file. Updating inflateall.unregistered14cd036bd2877 documentation i Loading inflateall.unregistered14cd036bd2877 Writing 'NAMESPACE' i Loading inflateall.unregistered14cd036bd2877 v R: R/unregistered_r.R was added to the config file v tests: tests/testthat/test-unregistered_r.R was added to the config file -- Delete dev/config_not_registered.csv ---------------------------------------- v The flat file flat_minimal.Rmd is going to be inflated -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- Documentation parameters were restored from attachment config file. Updating inflateall.unregistered14cd036bd2877 documentation i Loading inflateall.unregistered14cd036bd2877 Writing 'NAMESPACE' i Loading inflateall.unregistered14cd036bd2877 v The flat file flat_minimal.Rmd is going to be inflated Documentation parameters were restored from attachment config file. Updating inflateall.unregistered14cd036bd2877 documentation i Loading inflateall.unregistered14cd036bd2877 Writing 'NAMESPACE' i Loading inflateall.unregistered14cd036bd2877 v The flat file flat_minimal.Rmd is going to be inflated -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- cli-31624-5065 Documentation parameters were restored from attachment config file. Updating inflateall.unregistered14cd036bd2877 documentation i Loading inflateall.unregistered14cd036bd2877 Writing 'NAMESPACE' Writing 'my_fun.Rd' i Loading inflateall.unregistered14cd036bd2877 -- Delete dev/config_not_registered.csv ---------------------------------------- v The flat file flat_minimal.Rmd is going to be inflated -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- Documentation parameters were restored from attachment config file. Updating inflateall.unregistered14cd036bd2877 documentation i Loading inflateall.unregistered14cd036bd2877 Writing 'NAMESPACE' i Loading inflateall.unregistered14cd036bd2877 ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.empties14cd04c2d4d62". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── -- config file for dev/flat_full.Rmd ------------------------------------------- -- check not registered files -------------------------------------------------- v There are no unregistered files. Documentation parameters were restored from attachment config file. Updating inflate.empties14cd04c2d4d62 documentation i Loading inflate.empties14cd04c2d4d62 i Loading inflate.empties14cd04c2d4d62 ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── -- config file for dev/flat_full.Rmd ------------------------------------------- -- check not registered files -------------------------------------------------- There are no files in the package. Did you inflate it once? Documentation parameters were restored from attachment config file. Updating inflate.empties14cd04c2d4d62 documentation i Loading inflate.empties14cd04c2d4d62 i Loading inflate.empties14cd04c2d4d62 ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflateall.stylers14cd05a1521a6". ── config file for dev/flat_minimal.Rmd ──────────────────────────────────────── v The flat file flat_minimal.Rmd is going to be inflated -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- v There are no unregistered files. -- Let's apply stylers to the package ------------------------------------------ Documentation parameters were restored from attachment config file. Updating inflateall.stylers14cd05a1521a6 documentation i Loading inflateall.stylers14cd05a1521a6 Writing 'NAMESPACE' i Loading inflateall.stylers14cd05a1521a6 v The flat file flat_minimal.Rmd is going to be inflated -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- v There are no unregistered files. -- Let's apply stylers to the package ------------------------------------------ Documentation parameters were restored from attachment config file. Updating inflateall.stylers14cd05a1521a6 documentation i Loading inflateall.stylers14cd05a1521a6 Writing 'NAMESPACE' i Loading inflateall.stylers14cd05a1521a6 v The flat file flat_minimal.Rmd is going to be inflated -- config file for dev/flat_minimal.Rmd ---------------------------------------- -- check not registered files -------------------------------------------------- v There are no unregistered files. -- Let's apply stylers to the package ------------------------------------------ Documentation parameters were restored from attachment config file. Updating inflateall.stylers14cd05a1521a6 documentation i Loading inflateall.stylers14cd05a1521a6 Writing 'NAMESPACE' i Loading inflateall.stylers14cd05a1521a6 ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/diag14cd02461d99". ── config file for dev/flat_minimal.Rmd ──────────────────────────────────────── ── config file for dev/flat_minimal_2.Rmd ────────────────────────────────────── v The flat file flat_minimal_2.Rmd is going to be inflated v R: R/zaza.R was added to the config file -- config file for dev/test_minimal.Rmd ---------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/readinflateparams14cd023d9f8a". ── config file for dev/flat_minimal.Rmd ──────────────────────────────────────── ── config file for dev/flat_minimal_2.Rmd ────────────────────────────────────── v R: R/zaza.R was added to the config file ! Some paths appear multiple times in the config file. The yaml was forced with `force = TRUE`. Please verify the source of these scripts in the existing yaml file or in the df_files provided: ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/inflate.qmd14cd01bd21204". ── config file for dev/dev-template-tests.qmd ────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". [1] "==== inflate_utils ====" ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/isrproj.pkg14cd0be01458". ✔ Adding "^isrproj\\.pkg14cd0be01458\\.Rproj$" to '.Rbuildignore'. ✔ Adding "^\\.Rproj\\.user$" to '.Rbuildignore'. ℹ Loading isrproj.pkg14cd0be01458 Writing 'NAMESPACE' ✔ Adding knitr to 'Suggests' field in DESCRIPTION. ☐ Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is installed. ☐ Then directly refer to functions with `knitr::fun()`. ✔ Adding "inst/doc" to '.gitignore'. ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ R: R/my_median.R was added to the config file ✔ R: R/my_other_median.R was added to the config file ✔ tests: tests/testthat/test-my_median.R was added to the config file ✔ tests: tests/testthat/test-my_other_median.R was added to the config file ✔ vignettes: vignettes/get-started.Rmd was added to the config file Saving attachment parameters to yaml config file Updating isrproj.pkg14cd0be01458 documentation ℹ Loading isrproj.pkg14cd0be01458 Writing 'NAMESPACE' Writing 'my_median.Rd' Writing 'my_other_median.Rd' Writing 'sub_median.Rd' ℹ Loading isrproj.pkg14cd0be01458 [+] 3 package(s) added: stats, rmarkdown, testthat. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/isrproj.pkg14cd0be01458". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/vignette.head14cd03dc15902". v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/checkpk.gname14cd065c3bd6". i Loading COUCOU Writing 'NAMESPACE' v Adding knitr to 'Suggests' field in DESCRIPTION. [ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is installed. [ ] Then directly refer to functions with `knitr::fun()`. v Adding "inst/doc" to '.gitignore'. -- config file for dev/flat_full.Rmd ------------------------------------------- v R: R/my_median.R was added to the config file v R: R/my_other_median.R was added to the config file v tests: tests/testthat/test-my_median.R was added to the config file v tests: tests/testthat/test-my_other_median.R was added to the config file v vignettes: vignettes/get-started.Rmd was added to the config file Saving attachment parameters to yaml config file Updating checkpk.gname14cd065c3bd6 documentation i Loading COUCOU Writing 'NAMESPACE' Writing 'my_median.Rd' Writing 'my_other_median.Rd' Writing 'sub_median.Rd' i Loading COUCOU [+] 3 package(s) added: stats, rmarkdown, testthat. v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/clean14cd0d92715c". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ! The flat file flat_minimal2.Rmd is not going to be inflated because it is 'inactive or deprecated' v The flat file flat_minimal.Rmd is going to be inflated ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/registered14cd02bf01fbd". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── cli-31624-6068 v R: R/my_median.R was added to the config file v R: R/my_other_median.R was added to the config file v tests: tests/testthat/test-my_median.R was added to the config file v tests: tests/testthat/test-my_other_median.R was added to the config file v vignettes: vignettes/get-started.Rmd was added to the config file cli-31624-6094 v R: R/to_keep.R was added to the config file i Some files group already existed and were modified: keep v R: R/to_keep.R was added to the config file i Some files group already existed and were modified: keep ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/register14cd057123ef8/fusentest". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/register14cd057123ef8/fusentest". v R: R/to_keep.R was added to the config file v There are no unregistered files. -- config file for dev/flat_new_one.Rmd ---------------------------------------- v There are no unregistered files. There is no file to register or everything was already registered -- config file for dev/flat_new_one.Rmd ---------------------------------------- v There are no unregistered files. There is no file to register or everything was already registered v Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/register14cd05732220c". ── config file for dev/flat_full.Rmd ─────────────────────────────────────────── -- Delete dev/config_not_registered.csv ---------------------------------------- cli-31624-6376 -- Delete dev/config_not_registered.csv ---------------------------------------- i Some files group already existed and were modified: keep i Some files group already existed and were modified: keep ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/rename14cd013d9176f". i The flat file D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\rename14cd013d9176f/dev/flat_full.Rmd has been renamed to D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/rename14cd013d9176f/dev/flat_new.Rmd i The flat file dev/flat_new.Rmd has been renamed to dev/flat_other_new.Rmd i The flat file flat_new.Rmd has been updated in the config file. -- config file for dev/flat_other_new.Rmd -------------------------------------- i The flat file dev/flat_other_new.Rmd has been renamed to dev/flat_new2.Rmd i The flat file flat_other_new.Rmd has been updated in the config file. i The flat file flat_new2.Rmd has been updated in the inflated files. i The flat file dev/flat_new2.Rmd has been renamed to otherdev/flat_new_with_path.Rmd i The flat file flat_new2.Rmd has been updated in the config file. i The flat file flat_new_with_path.Rmd has been updated in the inflated files. ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.second.flat14cd06f016b8c/foosen.process". ── config file for dev/flat_first.Rmd ────────────────────────────────────────── '0-dev_history.Rmd' already exists. It was not overwritten. Set `add_flat_template(overwrite = TRUE)` if you want to do so. -- config file for dev/flat_second.Rmd ----------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.second.flat14cd036d5203a/foosen.process". ── config file for dev/flat_first.Rmd ────────────────────────────────────────── '0-dev_history.Rmd' already exists. It was not overwritten. Set `add_flat_template(overwrite = TRUE)` if you want to do so. -- config file for dev/flat_second.Rmd ----------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.second.flat14cd02166944/foosen.process". ── config file for dev/flat_first.Rmd ────────────────────────────────────────── '0-dev_history.Rmd' already exists. It was not overwritten. Set `add_flat_template(overwrite = TRUE)` if you want to do so. -- config file for dev/flat_second.Rmd ----------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.second.flat14cd05bd61af/foosen.process". ── config file for dev/flat_first.Rmd ────────────────────────────────────────── -- config file for dev/flat_second.Rmd ----------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.second.flat14cd04e0d2b9f/foosen.process". ── config file for dev/flat_first.Rmd ────────────────────────────────────────── -- config file for dev/flat_second.Rmd ----------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.second.flat14cd06c8fae/foosen.process". ── config file for dev/flat_first.Rmd ────────────────────────────────────────── -- config file for dev/flat_second.Rmd ----------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.second.flat14cd035a95fff/foosen.process". ── config file for dev/flat_first.Rmd ────────────────────────────────────────── -- config file for dev/flat_second.Rmd ----------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.second.flat14cd0620ee90/foosen.process". ── config file for dev/flat_first.Rmd ────────────────────────────────────────── -- config file for dev/flat_second.Rmd ----------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". ── Creating new directory: D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\all.temp ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.second.flat14cd0527b630c/foosen.process". ── config file for dev/flat_first.Rmd ────────────────────────────────────────── -- config file for dev/flat_second.Rmd ----------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- -- config file for dev/flat_first.Rmd ------------------------------------------ -- config file for dev/flat_second.Rmd ----------------------------------------- -- check not registered files -------------------------------------------------- ✔ Setting active project to "D:/temp/2024_11_13_01_50_00_32639/Rtmpw5Dlhj/all.templates.knitteaching14cd02a42557b". [ FAIL 1 | WARN 1 | SKIP 14 | PASS 927 ] ══ Skipped tests (14) ══════════════════════════════════════════════════════════ • On CRAN (8): 'test-get_package_structure.R:22:5', 'test-get_package_structure.R:52:5', 'test-inflate-part2.R:40:5', 'test-inflate-part2.R:82:7', 'test-inflate-part2.R:82:7', 'test-inflate-part2.R:82:7', 'test-inflate-part2.R:306:5', 'test-register_config_file.R:386:3' • On Windows (2): 'test-inflate-part1.R:201:5', 'test-inflate-part2.R:429:7' • empty test (1): 'test-inflate_utils.R:180:1' • interactive() is not TRUE (3): 'test-inflate_all.R:368:5', 'test-init_share_on_github.R:4:3', 'test-skeleton.R:2:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-rename_flat_file.R:38:5'): rename_flat_file renames inside the flat file ── Error in `grep(flat_file, lines)`: invalid regular expression 'D:\temp\2024_11_13_01_50_00_32639\Rtmpw5Dlhj\rename14cd013d9176f/dev/flat_full.Rmd', reason 'Invalid back reference' Backtrace: ▆ 1. ├─testthat::expect_equal(length(grep(flat_file, lines)), 0) at test-rename_flat_file.R:38:5 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─base::grep(flat_file, lines) [ FAIL 1 | WARN 1 | SKIP 14 | PASS 927 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [34s] OK * checking PDF version of manual ... [17s] OK * checking HTML version of manual ... [3s] OK * DONE Status: 1 ERROR