Calculate F Statistics Using Mixed Haploid and Diploid Organism Data

---

Documentation for package ‘HaploDiploidEquilibrium’ version 0.1.0

• DESCRIPTION file.
• Package NEWS.

Help Pages

allele.freq.WS	Compute per-window reference allele frequencies across populations
compute.Female.Male.allele.W	Compute per-window reference allele frequencies by sex
compute_allele.freqs_W	Compute per-window genotype frequencies, allele frequencies, and Fis
compute_Hs_W	Compute per-window Nei's H (gene diversity)
pairwise.fst	Compute pairwise Fst for all population pairs
summarize_fst	Summarize genome-wide Fst per population pair
summarize_geno	Summarize per-window genotype frequencies per population
summarize_NeisH	Summarize per-window Nei's H per population
summarize_sex_ref	Summarize per-sex reference allele frequencies per population
vcf2GT	Import a VCF file and extract genotype and positional data