* using log directory 'd:/Rcompile/CRANpkg/local/4.5/MBNMAdose.Rcheck' * using R Under development (unstable) (2024-11-12 r87322 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'MBNMAdose/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'MBNMAdose' version '0.4.3' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'MBNMAdose' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [0s] OK * checking loading without being on the library search path ... [0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [15s] OK * checking Rd files ... [2s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [9s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [1s] OK Running 'testthat.R' [1s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [530s] ERROR Error(s) in re-building vignettes: --- re-building 'consistencychecking-3.Rmd' using rmarkdown --- finished re-building 'consistencychecking-3.Rmd' --- re-building 'dataexploration-1.Rmd' using rmarkdown Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd) Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building 'dataexploration-1.Rmd' --- re-building 'mbnmadose-overview.Rmd' using rmarkdown --- finished re-building 'mbnmadose-overview.Rmd' --- re-building 'metaregression-6.Rmd' using rmarkdown --- finished re-building 'metaregression-6.Rmd' --- re-building 'nma_in_mbnmadose.Rmd' using rmarkdown Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd) Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building 'nma_in_mbnmadose.Rmd' --- re-building 'outputs-4.Rmd' using rmarkdown --- finished re-building 'outputs-4.Rmd' --- re-building 'predictions-5.Rmd' using rmarkdown --- finished re-building 'predictions-5.Rmd' --- re-building 'runmbnmadose-2.Rmd' using rmarkdown Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd) Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics: non-numeric argument to mathematical function --- failed re-building 'runmbnmadose-2.Rmd' SUMMARY: processing the following files failed: 'dataexploration-1.Rmd' 'nma_in_mbnmadose.Rmd' 'runmbnmadose-2.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [24s] OK * checking HTML version of manual ... [14s] OK * DONE Status: 1 ERROR