* using log directory 'd:/Rcompile/CRANpkg/local/4.5/semlbci.Rcheck' * using R Under development (unstable) (2024-11-12 r87322 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'semlbci/DESCRIPTION' ... OK * this is package 'semlbci' version '0.11.2' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'semlbci' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [8s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [34s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [38s] ERROR Running 'testthat.R' [37s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(semlbci) > > test_check("semlbci") Starting 2 test processes [ FAIL 1 | WARN 0 | SKIP 166 | PASS 133 ] ══ Skipped tests (166) ═════════════════════════════════════════════════════════ • For running all interactive session tests (1): 'test-1_run_interactive_session_tests.R:1:1' • On CRAN (122): 'test-semlbci_wn_mg_ustd_cfa_user_eq.R:1:1', 'test-semlbci_wn_mg_ustd_pa_user_eq.R:1:1', 'test-semlbci_wn_mg_ustd_sem_user_eq.R:1:1', 'test-ur_ci_bound_ur_i_mg_ustd_1.R:1:1', 'test-ur_ci_bound_ur_i_mg_std_1.R:1:1', 'test-ur_ci_bound_ur_i_std_1.R:1:1', 'test-ur_ci_bound_ur_i_rb_ustd_1.R:1:1', 'test-ur_ci_bound_ur_i_ustd_1.R:1:1', 'test-ur_ci_bound_ur_mg_std_1.R:1:1', 'test-ur_ci_bound_ur_rb_mg_ustd_1.R:1:1', 'test-ur_ci_bound_ur_mg_ustd_1.R:1:1', 'test-ur_ci_bound_ur_rb_ustd_1.R:1:1', 'test-ur_ci_bound_ur_std_1.R:1:1', 'test-ur_ci_bound_ur_ustd_1.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_cfa.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_cfa_eq.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_cfa_user.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_cfa_user_eq.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_pa.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_pa_eq.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_pa_user.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_pa_user_eq.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_sem.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_sem_eq.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_sem_user.R:1:1', 'test-ci_bound_wn_i_mg_rb_std_sem_user_eq.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_cfa.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_cfa_eq.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_cfa_user.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_cfa_user_eq.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_pa.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_pa_eq.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_pa_user.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_pa_user_eq.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_sem.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_sem_eq.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_sem_user.R:1:1', 'test-ci_bound_wn_i_mg_rb_ustd_sem_user_eq.R:1:1', 'test-ci_bound_wn_i_mg_std_cfa.R:1:1', 'test-ci_bound_wn_i_mg_std_cfa_eq.R:1:1', 'test-ci_bound_wn_i_mg_std_cfa_user.R:1:1', 'test-ci_bound_wn_i_mg_std_cfa_user_eq.R:1:1', 'test-ci_bound_wn_i_mg_std_pa.R:1:1', 'test-ci_bound_wn_i_mg_std_pa_eq.R:1:1', 'test-ci_bound_wn_i_mg_std_pa_user.R:1:1', 'test-ci_bound_wn_i_mg_std_pa_user_eq.R:1:1', 'test-ci_bound_wn_i_mg_std_sem.R:1:1', 'test-ci_bound_wn_i_mg_std_sem_user.R:1:1', 'test-ci_bound_wn_i_mg_std_sem_eq.R:1:1', 'test-ci_bound_wn_i_mg_std_sem_user_eq.R:1:1', 'test-ci_bound_wn_i_mg_ustd_cfa_eq.R:1:1', 'test-ci_bound_wn_i_mg_ustd_cfa_user.R:1:1', 'test-ci_bound_wn_i_mg_ustd_cfa_user_eq.R:1:1', 'test-ci_bound_wn_i_mg_ustd_pa_eq.R:1:1', 'test-ci_bound_wn_i_mg_ustd_pa_user.R:1:1', 'test-ci_bound_wn_i_mg_ustd_pa_user_eq.R:1:1', 'test-ci_bound_wn_i_mg_ustd_sem_eq.R:1:1', 'test-ci_bound_wn_i_mg_ustd_sem_user.R:1:1', 'test-ci_bound_wn_i_mg_ustd_sem_user_eq.R:1:1', 'test-ci_bound_wn_i_rb_std_cfa.R:1:1', 'test-ci_bound_wn_i_rb_std_cfa_eq.R:1:1', 'test-ci_bound_wn_i_rb_std_cfa_user.R:1:1', 'test-ci_bound_wn_i_rb_std_cfa_user_eq.R:1:1', 'test-ci_bound_wn_i_rb_std_pa.R:1:1', 'test-ci_bound_wn_i_rb_std_pa_eq.R:1:1', 'test-ci_bound_wn_i_rb_std_pa_user.R:1:1', 'test-ci_bound_wn_i_rb_std_pa_user_eq.R:1:1', 'test-ci_bound_wn_i_rb_std_sem.R:1:1', 'test-ci_bound_wn_i_rb_std_sem_eq.R:1:1', 'test-ci_bound_wn_i_rb_std_sem_user.R:1:1', 'test-ci_bound_wn_i_rb_std_sem_user_eq.R:1:1', 'test-ci_bound_wn_i_rb_ustd_cfa.R:1:1', 'test-ci_bound_wn_i_rb_ustd_cfa_eq.R:1:1', 'test-ci_bound_wn_i_rb_ustd_cfa_user.R:1:1', 'test-ci_bound_wn_i_rb_ustd_pa.R:1:1', 'test-ci_bound_wn_i_rb_ustd_cfa_user_eq.R:1:1', 'test-ci_bound_wn_i_rb_ustd_pa_eq.R:1:1', 'test-ci_bound_wn_i_rb_ustd_pa_user.R:1:1', 'test-ci_bound_wn_i_rb_ustd_pa_user_eq.R:1:1', 'test-ci_bound_wn_i_rb_ustd_sem.R:1:1', 'test-ci_bound_wn_i_rb_ustd_sem_eq.R:1:1', 'test-ci_bound_wn_i_rb_ustd_sem_user.R:1:1', 'test-ci_bound_wn_i_rb_ustd_sem_user_eq.R:1:1', 'test-ci_bound_wn_i_std_cfa_eq.R:1:1', 'test-ci_bound_wn_i_std_cfa_user.R:1:1', 'test-ci_bound_wn_i_std_cfa_user_eq.R:1:1', 'test-ci_bound_wn_i_std_pa_eq.R:1:1', 'test-ci_bound_wn_i_std_pa_user.R:1:1', 'test-ci_bound_wn_i_std_pa_user_eq.R:1:1', 'test-ci_bound_wn_i_std_sem_eq.R:1:1', 'test-ci_bound_wn_i_std_sem_user.R:1:1', 'test-ci_bound_wn_i_std_sem_user_eq.R:1:1', 'test-ci_bound_wn_i_ustd_cfa_eq.R:1:1', 'test-ci_bound_wn_i_ustd_cfa_user.R:1:1', 'test-ci_bound_wn_i_ustd_pa_eq.R:1:1', 'test-ci_bound_wn_i_ustd_pa_user.R:1:1', 'test-ci_bound_wn_i_ustd_sem_eq.R:1:1', 'test-ci_bound_wn_i_ustd_sem_user.R:1:1', 'test-ci_bound_wn_i_z_print_maxtime.R:1:1', 'test-ci_i_one_rb_std_pa.R:1:1', 'test-ci_i_one_std_pa.R:1:1', 'test-ci_i_one_std_pa_ur.R:1:1', 'test-ci_i_one_ustd_pa_ur.R:1:1', 'test-confint_semlbci.R:1:1', 'test-scaling_factor3_mg_rb_std_sem_user_eq.R:1:1', 'test-scaling_factor3_mg_rb_ustd_sem_user_eq.R:1:1', 'test-scaling_factor3_mg_wn_sem_std.R:1:1', 'test-scaling_factor3_std_sem_user_eq.R:1:1', 'test-scaling_factor3_mg_wn_sem_ustd.R:1:1', 'test-scaling_factor3_wn_sem_std.R:1:1', 'test-scaling_factor3_ustd_sem_user_eq.R:1:1', 'test-scaling_factor3_wn_sem_ustd.R:1:1', 'test-scaling_factor_int_comp_mg_wn_sem_std.R:1:1', 'test-scaling_factor_int_comp_wn_sem_std.R:1:1', 'test-semlbci_print_text.R:1:1', 'test-semlbci_rb_std_pa.R:1:1', 'test-semlbci_std_wn.R:1:1', 'test-semlbci_std_wn_derived_parameter.R:1:1', 'test-semlbci_std_wn_eq_constr.R:1:1', 'test-semlbci_update_wn_mg_ustd_cfa_user_eq.R:1:1', 'test-std_lav_one_factor.R:1:1', 'test-ur_gen_est_i.R:1:1' • Plots: Test in interactive sections (1): 'test-plot_likelihood.R:1:1' • Run it only if are major changes in the arguments in ci_i_* functions (1): 'test-extra_arguments.R:1:1' • Run only if data changed (12): 'test-ci_bound_wn_i_mg_ustd_pa.R:39:1', 'test-ci_bound_wn_i_mg_ustd_cfa.R:39:1', 'test-ci_bound_wn_i_mg_ustd_sem.R:40:1', 'test-ci_bound_wn_i_std_pa.R:39:1', 'test-ci_bound_wn_i_std_cfa.R:41:1', 'test-ci_bound_wn_i_std_sem.R:40:1', 'test-ci_bound_wn_i_ustd_cfa.R:38:1', 'test-ci_bound_wn_i_ustd_pa.R:39:1', 'test-ci_bound_wn_i_ustd_cfa_user_eq.R:41:1', 'test-ci_bound_wn_i_ustd_pa_user_eq.R:41:1', 'test-ci_bound_wn_i_ustd_sem.R:40:1', 'test-ci_bound_wn_i_ustd_sem_user_eq.R:43:1' • Run only if there is a major change in std_method (18): 'test-ci_bound_wn_i_int_comp_mg_std_cfa.R:1:1', 'test-ci_bound_wn_i_int_comp_mg_std_cfa_user_eq.R:1:1', 'test-ci_bound_wn_i_int_comp_mg_std_pa.R:1:1', 'test-ci_bound_wn_i_int_comp_mg_std_pa_user_eq.R:1:1', 'test-ci_bound_wn_i_int_comp_mg_std_sem.R:1:1', 'test-ci_bound_wn_i_int_comp_mg_std_sem_user_eq.R:1:1', 'test-ci_bound_wn_i_int_comp_rb_std_cfa.R:1:1', 'test-ci_bound_wn_i_int_comp_rb_std_cfa_user_eq.R:1:1', 'test-ci_bound_wn_i_int_comp_rb_std_pa.R:1:1', 'test-ci_bound_wn_i_int_comp_rb_std_pa_user_eq.R:1:1', 'test-ci_bound_wn_i_int_comp_rb_std_sem.R:1:1', 'test-ci_bound_wn_i_int_comp_rb_std_sem_user_eq.R:1:1', 'test-ci_bound_wn_i_int_comp_std_cfa.R:1:1', 'test-ci_bound_wn_i_int_comp_std_cfa_user_eq.R:1:1', 'test-ci_bound_wn_i_int_comp_std_pa.R:1:1', 'test-ci_bound_wn_i_int_comp_std_pa_user_eq.R:1:1', 'test-ci_bound_wn_i_int_comp_std_sem.R:1:1', 'test-ci_bound_wn_i_int_comp_std_sem_user_eq.R:1:1' • Test parallel processing: Test in interactive sections (7): 'test-semlbci_lavaan_cfa.R:1:1', 'test-semlbci_lavaan_cfa_mg.R:1:1', 'test-semlbci_lavaan_indirect.R:1:1', 'test-semlbci_lavaan_sem.R:1:1', 'test-semlbci_lavaan_sem_ur.R:1:1', 'test-semlbci_lavaan_sem_ur_rb.R:1:1', 'test-semlbci_wn_parallel.R:1:1' • To be run in an interactive session (4): 'test-1_run_selected_tests.R:1:1', 'test-ci_bound_wn_i_all_std.R:1:1', 'test-semlbci_nearby_rb_std.R:1:1', 'test-ur_gen_userp.R:38:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-ci_bound_wn_i_mg_ustd_sem.R:36:5'): Check against precomputed answers ── out1l$bound (`actual`) not equal to 0.8718068 (`expected`). `actual`: 0.87191 `expected`: 0.87181 [ FAIL 1 | WARN 0 | SKIP 166 | PASS 133 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [6s] OK * checking PDF version of manual ... [30s] OK * checking HTML version of manual ... [6s] OK * DONE Status: 1 ERROR