Last updated on 2025-05-06 03:51:04 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.0 | 3.33 | 48.61 | 51.94 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.2.0 | 2.04 | 36.18 | 38.22 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.2.0 | 84.08 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.0 | 88.43 | OK | |||
| r-devel-windows-x86_64 | 0.2.0 | 5.00 | 236.00 | 241.00 | OK | |
| r-patched-linux-x86_64 | 0.2.0 | 4.66 | 44.97 | 49.63 | OK | |
| r-release-linux-x86_64 | 0.2.0 | 3.24 | 45.24 | 48.48 | OK | |
| r-release-macos-arm64 | 0.2.0 | 42.00 | OK | |||
| r-release-macos-x86_64 | 0.2.0 | 63.00 | OK | |||
| r-release-windows-x86_64 | 0.2.0 | 6.00 | 676.00 | 682.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.2.0 | 47.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.2.0 | 75.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.2.0 | 6.00 | 97.00 | 103.00 | OK |
Version: 0.2.0
Check: examples
Result: ERROR
Running examples in 'gtexr-Ex.R' failed
The error most likely occurred in:
> ### Name: get_linkage_disequilibrium_by_variant_data
> ### Title: Get Linkage Disequilibrium By Variant Data
> ### Aliases: get_linkage_disequilibrium_by_variant_data
>
> ### ** Examples
>
> get_linkage_disequilibrium_by_variant_data("chr1_159245536_C_T_b38")
Error in `httr2::req_perform()`:
! Failed to perform HTTP request.
Caused by error in `curl::curl_fetch_memory()`:
! Timeout was reached [gtexportal.org]: Operation too slow. Less than 1 bytes/sec transferred the last 600 seconds
Backtrace:
▆
1. └─gtexr::get_linkage_disequilibrium_by_variant_data("chr1_159245536_C_T_b38")
2. └─gtexr:::gtex_query(endpoint = "dataset/ldByVariant", process_linkage_disequilibrium_resp_json)
3. └─gtexr:::perform_gtex_request_json(gtex_request, call = rlang::caller_env())
4. ├─purrr::map(...)
5. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
6. │ └─purrr:::vctrs_vec_compat(.x, .purrr_user_env)
7. ├─httr2::resp_body_json(perform_gtex_request(gtex_request, call = call))
8. │ └─httr2:::check_response(resp)
9. │ └─httr2:::is_response(resp)
10. └─gtexr:::perform_gtex_request(gtex_request, call = call)
11. └─httr2::req_perform(...)
12. └─httr2:::handle_resp(req, resp, error_call = error_call)
13. └─rlang::cnd_signal(resp)
Execution halted
Flavor: r-release-windows-x86_64