Last updated on 2025-10-31 02:50:35 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.2 | 14.14 | 124.55 | 138.69 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.2.2 | 9.24 | 82.02 | 91.26 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.2.2 | 125.00 | 102.75 | 227.75 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.2.2 | 71.00 | 135.54 | 206.54 | OK | |
| r-devel-windows-x86_64 | 0.2.2 | 16.00 | 112.00 | 128.00 | OK | |
| r-patched-linux-x86_64 | 0.2.2 | 15.50 | 119.50 | 135.00 | OK | |
| r-release-linux-x86_64 | 0.2.2 | 14.91 | 119.04 | 133.95 | OK | |
| r-release-macos-arm64 | 0.2.2 | 7.00 | 52.00 | 59.00 | OK | |
| r-release-macos-x86_64 | 0.2.2 | 13.00 | 93.00 | 106.00 | OK | |
| r-release-windows-x86_64 | 0.2.2 | 17.00 | 113.00 | 130.00 | OK | |
| r-oldrel-macos-arm64 | 0.2.2 | 7.00 | 46.00 | 53.00 | OK | |
| r-oldrel-macos-x86_64 | 0.2.2 | 11.00 | 74.00 | 85.00 | OK | |
| r-oldrel-windows-x86_64 | 0.2.2 | 22.00 | 149.00 | 171.00 | OK |
Version: 0.2.2
Check: examples
Result: ERROR
Running examples in ‘lolliplot-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: lolliplot
> ### Title: Lolliplots
> ### Aliases: lolliplot
>
> ### ** Examples
>
> SNP <- c(10, 100, 105, 108, 400, 410, 420, 600, 700, 805, 840, 1400, 1402)
> x <- sample.int(100, length(SNP))
> SNP.gr <- GenomicRanges::GRanges("chr1", IRanges::IRanges(SNP, width=1, names=paste0("snp", SNP)),
+ value1=x, value2=100-x)
> SNP.gr$color <- rep(list(c("red", 'blue')), length(SNP))
> SNP.gr$border <- sample.int(7, length(SNP), replace=TRUE)
> features <- GenomicRanges::GRanges(
+ "chr1", IRanges::IRanges(
+ c(1, 501, 1001),
+ width=c(120, 500, 405),
+ names=paste0("block", 1:3)),
+ color="black",
+ fill=c("#FF8833", "#51C6E6", "#DFA32D"),
+ height=c(0.1, 0.05, 0.08),
+ label.parameter.rot=45)
> lolliplot(SNP.gr, features, type="pie")
Error in S4Vectors:::load_package_gracefully("XVector", "by the range() method ", :
Could not load package XVector. Is it installed?
Note that the XVector package is required by the range() method for
CompressedIRangesList objects. Please install it with:
BiocManager::install("XVector")
Calls: lolliplot ... .local -> .range_CompressedIRangesList -> <Anonymous>
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.2
Check: examples
Result: ERROR
Running examples in ‘lolliplot-Ex.R’ failed
The error most likely occurred in:
> ### Name: lolliplot
> ### Title: Lolliplots
> ### Aliases: lolliplot
>
> ### ** Examples
>
> SNP <- c(10, 100, 105, 108, 400, 410, 420, 600, 700, 805, 840, 1400, 1402)
> x <- sample.int(100, length(SNP))
> SNP.gr <- GenomicRanges::GRanges("chr1", IRanges::IRanges(SNP, width=1, names=paste0("snp", SNP)),
+ value1=x, value2=100-x)
> SNP.gr$color <- rep(list(c("red", 'blue')), length(SNP))
> SNP.gr$border <- sample.int(7, length(SNP), replace=TRUE)
> features <- GenomicRanges::GRanges(
+ "chr1", IRanges::IRanges(
+ c(1, 501, 1001),
+ width=c(120, 500, 405),
+ names=paste0("block", 1:3)),
+ color="black",
+ fill=c("#FF8833", "#51C6E6", "#DFA32D"),
+ height=c(0.1, 0.05, 0.08),
+ label.parameter.rot=45)
> lolliplot(SNP.gr, features, type="pie")
Error in S4Vectors:::load_package_gracefully("XVector", "by the range() method ", :
Could not load package XVector. Is it installed?
Note that the XVector package is required by the range() method for
CompressedIRangesList objects. Please install it with:
BiocManager::install("XVector")
Calls: lolliplot ... .local -> .range_CompressedIRangesList -> <Anonymous>
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang