Last updated on 2025-07-24 03:50:03 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.44 | 244.35 | 257.79 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.76 | 224.85 | 235.61 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 181.00 | 200.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.69 | 261.54 | 276.23 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.66 | 250.48 | 264.14 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 181.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 182.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 238.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/130s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.465, system: 0.037, elapsed: 2.478 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.887, system: 0.057, elapsed: 14.029 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.014, elapsed: 0.276 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.730, system: 0.199, elapsed: 4.874 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.225 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.010, system: 0.337, elapsed: 22.772 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.035, elapsed: 2.362 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.081, system: 0.165, elapsed: 13.985 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.016, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.894, system: 0.233, elapsed: 5.543 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.009, elapsed: 0.256 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.385, system: 0.484, elapsed: 23.272 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.675, system: 0.062, elapsed: 2.458 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.159, system: 0.167, elapsed: 13.118 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.273 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.686, system: 0.195, elapsed: 9.400 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.386 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.182, system: 0.223, elapsed: 2.133 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.672, system: 0.692, elapsed: 28.901 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.484, system: 0.036, elapsed: 4.076 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.033, system: 0.141, elapsed: 19.818 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.016, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.799, system: 0.213, elapsed: 5.862 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.236 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.189, system: 0.468, elapsed: 15.619 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.511, system: 0.915, elapsed: 47.258 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.519, system: 0.040, elapsed: 3.084 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.948, system: 0.066, elapsed: 14.753 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.395 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.582, system: 0.190, elapsed: 5.793 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.004, elapsed: 0.197 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.931, system: 0.331, elapsed: 25.269 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.504, system: 0.035, elapsed: 2.013 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.959, system: 0.077, elapsed: 12.956 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.012, elapsed: 0.296 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.573, system: 0.156, elapsed: 8.226 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.341 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.922, system: 0.305, elapsed: 24.687 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.469, system: 0.025, elapsed: 3.354 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.974, system: 0.098, elapsed: 19.782 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.226 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.587, system: 0.198, elapsed: 5.784 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.164 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.063, system: 0.224, elapsed: 0.853 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.049, system: 0.599, elapsed: 31.187 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.542, system: 0.052, elapsed: 2.028 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.989, system: 0.139, elapsed: 11.699 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.257 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.558, system: 0.173, elapsed: 5.587 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.242 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.073, system: 0.424, elapsed: 15.020 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.125, system: 0.832, elapsed: 35.673 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64