### R code from vignette source 'Debug.Rnw' ################################################### ### code chunk number 1: Debug.Rnw:33-52 ################################################### cat(' library(foreach) registerDoSEQ() foreach(j=1:3, .errorhandling="pass") %dopar% { if(j==2) j + undefined_variable else j } # [[1]] # [1] 1 # # [[2]] # # # [[3]] # [1] 3 ') ################################################### ### code chunk number 2: Debug.Rnw:69-97 ################################################### cat(' library(doRedis) registerDoRedis("cazart") startLocalWorkers(n=1, timeout=1, queue="cazart", log="/tmp/cazart.log", loglevel=1) x <- foreach(j=1:3) %dopar% { logger(paste("hello from loop iteration ", j)) j } # Remove the work queue (terminating the worker process) removeQueue("cazart") Sys.sleep(2) # wait for the worker to terminate # Display the log file file.show("/tmp/cazart.log") # Processing task(s) 1...1 from queue cazart ID 9ba32925bee... # @ 2016-04-23 20:17:26 hostname 3406 hello from loop iteration 1 # Processing task(s) 2...2 from queue cazart ID 9ba32925bee... # @ 2016-04-23 20:17:26 hostname 3406 hello from loop iteration 2 # Processing task(s) 3...3 from queue cazart ID 9ba32925bee... # @ 2016-04-23 20:17:26 hostname 3406 hello from loop iteration 3 # Normal worker exit. ') ################################################### ### code chunk number 3: Debug.Rnw:138-148 ################################################### cat(' library(doRedis) registerDoRedis("cazart") x <- foreach(j=1:3) %dopar% { logger(paste(" log message from iteration", j)) j } removeQueue("cazart") # remove the work queue ') ################################################### ### code chunk number 4: Debug.Rnw:151-164 ################################################### cat(' library(doRedis) redisWorker(queue="cazart", loglevel=1, timeout=1) # Waiting for doRedis jobs. # Processing task(s) 1...1 from queue cazart ID 9ba77ba191c... # @ 2016-04-23 21:09:04 homer 3882 log message from iteration 1 # Processing task(s) 2...2 from queue cazart ID 9ba77ba191c... # @ 2016-04-23 21:09:04 homer 3882 log message from iteration 2 # Processing task(s) 3...3 from queue cazart ID 9ba77ba191c... # @ 2016-04-23 21:09:04 homer 3882 log message from iteration 3 # Normal worker exit. ')