= An Introduction to _fakemake_ :Author: "Andreas Dominik Cullmann" :Date: 2023-06-14, 12:55:05 :toc2: //// %\VignetteIndexEntry{An Introduction to fakemake} %\VignetteEngine{rasciidoc::rasciidoc} %\VignetteEncoding{UTF-8} //// == Why Mock the Unix Make Utility? There are https://en.wikipedia.org/wiki/List_of_build_automation_software[many] https://en.wikipedia.org/wiki/Build_automation[build systems], and even more uses for build systems (see <>, sections 11.10 and 11.11). I have been using the https://en.wikipedia.org/wiki/Make_(software)[unix make utility] when developing R packages since 2012. But sometimes I get caught on a machine where _make_ is not available and where I am not entitled to install it footnote:[This is a nice example of what restrictive software policies are good for: you end up with a buggy imitation like _fakemake_ instead of the well established original. You should not regulate software installations for programmers, unless you take away their interpreters/compilers.] This is why I wrote _fakemake_: to build an R package conditionally on the modification times of (file) dependencies without having to rely on external software. **If you have any proper build system at hand: stick to it, do not use _fakemake_.** == _withr_ and _knitr_ Throughout this vignette I use **R**'s temporary directory, often by using +withr::with_dir(tempdir(), ...)+. Because this is a vignette and the codes are examples. In real life, we would skip the temporary directory stuff. This vignette is built using _knitr_, which itself uses +sink()+. As +sink()+ is central to _fakemake_ for redirecting output to files in the make chain, I have to disable some of _knitr_'s output here and there. Don't worry, it's just because _knitr_ and _fakemake_ both want to use +sink()+ exclusively and it only affects vignettes built with _knitr_. == Makelists A makelist is _fakemake_'s representation of a Makefile. It's just a list of lists. Look at the minimal makelist provided by _fakemake_: //begin.rcode str(fakemake::provide_make_list("minimal", clean_sink = TRUE)) //end.rcode Each sublist represents a Makefile's target rule and has several items: at least a _target_ and either _code_ or _prerequisites_, possibly both. This makelist would still be a Makefile's valid representation if target rule #3 with target "a1.Rout" had no (or an empty) _code_ item. Other possible target rule entries are: - _alias_: An alias to target that would be easier to remember and/or type (we will come back to his <>). - _sink_: By default, all output of the _code_ item is dumped (well, with **R**'s `sink` function) into a file with the name given by _target_. If _target_ should be created by the _code_ you will want to redirect the output into _sink_ (we will come back to his <>). - _.PHONY_: If set to TRUE, the target is rebuilt unconditionally every time the target is hit (trying to mock GNU make's .PHONY-extension) (we will come back to his <>). == Using _fakemake_ Suppose we would have a minimal makelist: //begin.rcode ml <- fakemake::provide_make_list("minimal", clean_sink = TRUE) //end.rcode We can visualize the makelist (giving the +root+ is optional, in this case it just makes a neater plot): //begin.rcode makelist-plot, dev = "png", fig.cap = "A Makelist" fakemake::visualize(ml, root = "all.Rout") //end.rcode === Building and Rebuilding Now build the "all.Rout" _target_: //begin.rcode withr::with_dir(tempdir(), print(fakemake::make("all.Rout", ml))) //end.rcode We can see the files created: //begin.rcode show_file_mtime <- function(files = list.files(tempdir(), full.names = TRUE, pattern = "^.*\\.Rout")) { return(file.info(files)["mtime"]) } show_file_mtime() //end.rcode If we wait for a second and rerun the build process, we get: //begin.rcode # ensure the modification time would change if the files were recreated Sys.sleep(1) withr::with_dir(tempdir(), print(fakemake::make("all.Rout", ml))) show_file_mtime() //end.rcode Nothing changed. Good. Now, we change one file down the build chain: //begin.rcode fakemake::touch(file.path(tempdir(), "b1.Rout")) withr::with_dir(tempdir(), print(fakemake::make("all.Rout", ml))) show_file_mtime() //end.rcode Since a1.Rout depends on b1.Rout and all.Rout depends on a1.Rout, these targets get rebuilt while a2.Rout stays untouched. Had we touched a1.Rout, b1.Rout would not have been rebuilt: //begin.rcode, echo = FALSE # touch should do the job... Sys.sleep(1) //end.rcode //begin.rcode fakemake::touch(file.path(tempdir(), "a1.Rout")) withr::with_dir(tempdir(), print(fakemake::make("all.Rout", ml))) show_file_mtime() //end.rcode === Forcing the Build If you set the force option, you can force the target and all its prerequisites down the build chain to be built: //begin.rcode withr::with_dir(tempdir(), print(fakemake::make("all.Rout", ml, force = TRUE))) //end.rcode If you want to force the target itself, but not all its prerequisites, set +recursive = FALSE+: //begin.rcode withr::with_dir(tempdir(), print(fakemake::make("all.Rout", ml, force = TRUE, recursive = FALSE))) //end.rcode === Faking the Build If you don't actually want to run the recipes but would rather like to know what would happen if you ran the build chain (this mocks GNU make's -n option), you can set +dry_run = TRUE+: //begin.rcode file.remove(dir(tempdir(), pattern = ".*\\.Rout", full.names = TRUE)) withr::with_dir(tempdir(), print(fakemake::make("all.Rout", ml, dry_run = TRUE))) //end.rcode Note that no files have been created: //begin.rcode dir(tempdir(), pattern = ".*\\.Rout") //end.rcode So we recreate them now: //begin.rcode withr::with_dir(tempdir(), print(fakemake::make("all.Rout", ml))) dir(tempdir(), pattern = ".*\\.Rout") //end.rcode === Using Aliases [[aliases]] If you find a target rule's _target_ too hard to type, you can use an alias: //begin.rcode i <- which(sapply(ml, "[[", "target") == "all.Rout") ml[[i]]["alias"] <- "all" withr::with_dir(tempdir(), print(fakemake::make("all", ml, force = TRUE))) //end.rcode This is pointless here, but _target_s might be files down a directory tree like +log/roxygen2.Rout+ when building **R** packages: you might want to alias that target to +roxygen+ === Diverting [[diverting]] Output / Programmatically Creating a Target Rule's Target Target rule b1 dumps its output to b1.Rout: //begin.rcode cat(readLines(file.path(tempdir(), "b1.Rout")), sep = "\n") //end.rcode Suppose it would programmatically create the target: //begin.rcode i <- which(sapply(ml, "[[", "target") == "b1.Rout") ml[[i]]["code"] <- paste(ml[[i]]["code"], "cat('hello, world\n', file = \"b1.Rout\")", "print(\"foobar\")", sep = ";") withr::with_dir(tempdir(), print(fakemake::make("b1.Rout", ml, force = TRUE))) cat(readLines(file.path(tempdir(), "b1.Rout")), sep = "\n") //end.rcode You end up with a broken target file, __so you need to add a *sink*__: //begin.rcode ml[[i]]["sink"] <- "b1.txt" withr::with_dir(tempdir(), print(fakemake::make("b1.Rout", ml, force = TRUE))) //end.rcode Now you get what you wanted: //begin.rcode cat(readLines(file.path(tempdir(), "b1.Rout")), sep = "\n") cat(readLines(file.path(tempdir(), "b1.txt")), sep = "\n") //end.rcode We need sinks when the target's code creates the target, for example when it builds a package's tarball: we would want to get the output of building the tarball to be written to a file the path of which we specify via the target's sink. === No Code Targets Rule a1 has _code_ //begin.rcode i <- which(sapply(ml, "[[", "target") == "a1.Rout") ml[[i]]["code"] //end.rcode that prints "a1" into "a1.Rout": //begin.rcode cat(readLines(file.path(tempdir(), "a1.Rout")), sep = "\n") //end.rcode If we remove that code and its output file and rerun //begin.rcode ml[[i]]["code"] <- NULL withr::with_dir(tempdir(), print(fakemake::make("a1.Rout", ml, force = TRUE))) //end.rcode the file is still created (note that target rule b1 down the make chain is run since we did not set +recursive = FALSE+ ) but empty: //begin.rcode file.size(file.path(tempdir(), "a1.Rout")) //end.rcode === Phony [[phony]] Targets As you have seen, you can temporarily force a build. You may set a target to be .PHONY which forces it (but not its prerequisites) to be built: //begin.rcode ml[[i]][".PHONY"] <- TRUE withr::with_dir(tempdir(), print(fakemake::make("a1.Rout", ml))) //end.rcode == References - [[[Powers]]] Shelley Powers, Jerry Peek, Tim OReilly and Mike Loudikes. Unix Power Tools, O'Reilly & Associates, ISBN: 0-596-00330-7, 2002.