| Type: | Package |
| Title: | Download World Mammal Maps |
| Version: | 1.3.0 |
| Description: | Lightweight maps of mammals of the world. These maps are a comprehensive collection of maps aligned with the Mammal Diversity Database taxonomy of the American Society of Mammalogists. They are generated at low resolution for easy access, consultation and manipulation in shapefile format. The package connects to a binary backup hosted in the Digital Ocean cloud service and allows individual or batch download of any mammal species in the mdd taxonomy by providing the scientific species name. |
| License: | GPL (≥ 3) |
| Encoding: | UTF-8 |
| RoxygenNote: | 7.2.3 |
| Depends: | R (≥ 2.10) |
| LazyData: | true |
| Imports: | httr, progress, readr, stringr, terra, utils |
| URL: | <https://github.com/alrobles/mddmaps>, <https://alrobles.github.io/mddmaps/> <https://zenodo.org/records/10974868>, https://alrobles.github.io/mddmaps/ |
| BugReports: | https://github.com/alrobles/mdd/issues |
| NeedsCompilation: | no |
| Packaged: | 2024-05-12 06:30:35 UTC; alroble8 |
| Author: | Angel Robles 
[aut, cre] |
| Maintainer: | Angel Robles <a.l.robles.fernandez@gmail.com> |
| Repository: | CRAN |
| Date/Publication: | 2024-05-14 07:53:07 UTC |
Function to return mammal shapefiles of Rodentia order
Description
Function to return mammal shapefiles of Rodentia order
Usage
get_mdd(dir = NULL, version = "v1_2")
Arguments
dir |
A directory where to write the output |
version |
The mdd version order want to download |
Value
A SpatVector object with mammal shapefiles
Source
Expert range maps of global mammal distributions harmonized to according mdd database from American Mammalogist society. Data storage in doi:10.5281/zenodo.10806734
Examples
get_mdd(version = "test")
Function to return mammal species list avaliable by version
Description
Function to return mammal species list avaliable by version
Usage
get_mdd_list(version = "v1_2")
Arguments
version |
The taxonomy version |
Value
A data.frame object with mammal species by version
Source
Expert range maps of global mammal distributions harmonized to three taxonomic authorities doi:10.5281/zenodo.10806734
Examples
get_mdd_list(version = "test")
Title
Description
Title
Usage
get_mdd_map(species = NULL, order = NULL, version = "v1_3")
Arguments
species |
A vector of mammal species name. |
order |
A vector of mammal orders to retrive. |
version |
The version number of the mammal diversity database. |
Value
A SpatVector object with mammal shapefiles
Source
Expert curated range maps of global mammal distributions aligned according mdd database of American Mamalogist Society. doi:10.5281/zenodo.10806734
Examples
get_mdd_map(version = "test")
Function to return mammal shapefiles of Rodentia order
Description
Function to return mammal shapefiles of Rodentia order
Usage
get_mdd_order(order, version, dir = NULL)
Arguments
order |
The mammal order want to download |
version |
The taxonomy version |
dir |
A directory where to write the output |
Value
A SpatVector object with mammal shapefiles
Source
Expert range maps of global mammal distributions harmonised to three taxonomic authorities doi:10.5281/zenodo.10806734
Examples
get_mdd_order(version = "test")
Global Variables
Description
Global Variables
Arguments
x |
A string with the url to check if exist |
Value
A logic value if url exists
Species list from Mammal Diversity Database
Description
A list of species related with shapefiles in MDD. Includes taxonomy
Usage
mddSpList_v1_2
Format
mddSpList
A data frame with 6485 rows and 8 columns:
- Order
Order of the species
- Family
Family of the species
- Genus
Genus of the species
- Species
Species Name
- MDD_SciName
Species binomial name
...
Source
Expert range maps of global mammal distributions harmonized to three taxonomic authorities. doi:10.5281/zenodo.10806734
Species list from Mammal Diversity Database
Description
A list of species related with shapefiles in MDD. Includes taxonomy
Usage
mddSpList_v1_3
Format
mddSpList
A data frame with 6513 rows and 8 columns:
- Order
Order of the species
- Family
Family of the species
- Genus
Genus of the species
- Species
Species Name
- MDD_SciName
Species binomial name
...
Source
Expert range maps of global mammal distributions harmonised to three taxonomic authorities. doi:10.5281/zenodo.10806734
Species list from Mammal Diversity Database
Description
A list of species related with shapefiles in MDD. Includes taxonomy
Usage
mddSpList_v1_4
Format
mddSpList
A data frame with 6533 rows and 8 columns:
- Order
Order of the species
- Family
Family of the species
- Genus
Genus of the species
- Species
Species Name
- MDD_SciName
Species binomial name
...
Source
Expert range maps of global mammal distributions harmonized to three taxonomic authorities. doi:10.5281/zenodo.10806734
Url Exists
Description
Url Exists
Usage
url_exists(x, quiet = FALSE, ...)
Arguments
x |
A string with the url to check if exist |
quiet |
A logic if quiets |
... |
Ellipsis |
Value
A logic value if url exists