## ----decide-to-execute, cache=FALSE, echo=FALSE------------------------------- library("knitr") # The code in this vignette requires a functional Git setup. If a workflowr user # has a .git directory upstream of R's temporary diretory, then wflow_start will # fail. If this situation is detected, the code is not evaluated. if (git2r::in_repository(tempdir())) { opts_chunk$set(eval = FALSE) warning(workflowr:::wrap( "Because you have a Git repository upstream of R's temporary directory, none of the code below was executed. Please refer to the online documentation to see the output: https://workflowr.github.io/workflowr/articles/wflow-01-getting-started.html \n\nYou should consider removing the directory since it was likely created in error: ", workflowr:::git2r_slot(git2r::repository(tempdir(), discover = TRUE), "path"))) } # The code in this vignette requires pandoc. Not every CRAN server has pandoc # installed. if (!rmarkdown::pandoc_available()) { opts_chunk$set(eval = FALSE) message(workflowr:::wrap( "The code chunks below were not executed because this machine does not have pandoc installed." )) } ## ----chunk-options, cache=FALSE, include=FALSE-------------------------------- .tmp <- tempfile("wflow-01-getting-started-") .tmp <- workflowr:::absolute(.tmp) .project <- file.path(.tmp, "myproject") fs::dir_create(.project) opts_knit$set(root.dir = .project) opts_chunk$set(collapse = TRUE) ## ----load-workflowr----------------------------------------------------------- library("workflowr") ## ----wflow-git-config, eval=FALSE--------------------------------------------- # # Replace the example text with your information # wflow_git_config(user.name = "Your Name", user.email = "email@domain") ## ----wflow-start, eval=FALSE-------------------------------------------------- # wflow_start("myproject") ## ----wflow-start-hidden, echo=FALSE------------------------------------------- setwd(.tmp) unlink(.project, recursive = TRUE) wflow_start("myproject", user.name = "Your Name", user.email = "email@domain") ## ----wflow-build, eval=FALSE-------------------------------------------------- # wflow_build() ## ----wflow-build-hidden, echo=FALSE------------------------------------------- # Don't want to actually open the website when building the vignette wflow_build(view = FALSE) ## ----wflow-build-no-action---------------------------------------------------- wflow_build() ## ----wflow-view, eval=FALSE--------------------------------------------------- # wflow_view() ## ----edit-files, include=FALSE------------------------------------------------ for (f in file.path("analysis", c("index.Rmd", "about.Rmd", "license.Rmd"))) { cat("\nedit\n", file = f, append = TRUE) } ## ----wflow-status------------------------------------------------------------- wflow_status() ## ----wflow-publish, eval=FALSE------------------------------------------------ # wflow_publish(c("analysis/index.Rmd", "analysis/about.Rmd", "analysis/license.Rmd"), # "Publish the initial files for myproject") ## ----wflow-publish-hidden, echo=FALSE----------------------------------------- # Don't want to actually open the website when building the vignette wflow_publish(c("analysis/index.Rmd", "analysis/about.Rmd", "analysis/license.Rmd"), "Publish the initial files for myproject", view = FALSE) ## ----wflow-status-post-publish------------------------------------------------ wflow_status() ## ----wflow-use-github, eval=FALSE--------------------------------------------- # wflow_use_github("myname") ## ----wflow-use-github-hidden, echo=FALSE-------------------------------------- # Don't want to try to authenticate on GitHub wflow_use_github("myname", create_on_github = FALSE) ## ----wflow-git-push----------------------------------------------------------- wflow_git_push(dry_run = TRUE) ## ----create-file, eval=FALSE-------------------------------------------------- # wflow_open("analysis/first-analysis.Rmd") ## ----create-file-hidden, echo=FALSE------------------------------------------- # Don't want to actually open the file when building the vignette in RStudio wflow_open("analysis/first-analysis.Rmd", edit_in_rstudio = FALSE) ## ----edit-index, include=FALSE------------------------------------------------ cat("\nClick on this [link](first-analysis.html) to see my results.\n", file = "analysis/index.Rmd", append = TRUE) ## ----wflow-status-newfile----------------------------------------------------- wflow_status() ## ----wflow-publish-newfile, eval=FALSE---------------------------------------- # wflow_publish(c("analysis/index.Rmd", "analysis/first-analysis.Rmd"), # "Add my first analysis") ## ----wflow-publish-newfile-hidden, echo=FALSE--------------------------------- # Don't want to actually open the website when building the vignette wflow_publish(c("analysis/index.Rmd", "analysis/first-analysis.Rmd"), "Add my first analysis", view = FALSE) ## ----republish---------------------------------------------------------------- wflow_publish("analysis/_site.yml", republish = TRUE, dry_run = TRUE)